Notification click: activity already open

You need to set the launchMode attribute of the Activity you are starting to singleTop. This will cause incoming Intents to be delivered to the existing instance rather than starting a new instance when that Activity is already at the top of the task's stack.

This is done in the manifest by adding android:launchMode="singleTop" to the <activity> element. To access the latest Intent (if you are interested in any data that may have passed in with it), override onNewIntent() in your Activity.

Try setting the flags to Intent.FLAG_ACTIVITY_CLEAR_TOP | Intent.FLAG_ACTIVITY_SINGLE_TOP instead.

From the documentation for FLAG_ACTIVITY_CLEAR_TOP (emphasis mine):

If set, and the activity being launched is already running in the current task, then instead of launching a new instance of that activity, all of the other activities on top of it will be closed and this Intent will be delivered to the (now on top) old activity as a new Intent.

For example, consider a task consisting of the activities: A, B, C, D. If D calls startActivity() with an Intent that resolves to the component of activity B, then C and D will be finished and B receive the given Intent, resulting in the stack now being: A, B.

The currently running instance of activity B in the above example will either receive the new intent you are starting here in its onNewIntent() method, or be itself finished and restarted with the new intent. If it has declared its launch mode to be "multiple" (the default) and you have not set FLAG_ACTIVITY_SINGLE_TOP in the same intent, then it will be finished and re-created; for all other launch modes or if FLAG_ACTIVITY_SINGLE_TOP is set then this Intent will be delivered to the current instance's onNewIntent().

Use onNewIntent() for handling new data from notification click and refresh the activity.

In onNewIntent get the new data from the new intent(which served by the new notification) and catch them, for example:

title = intent.getStringExtra("title")

in onCreate previously :)

It will refresh present activity with new notification data.

You can also follow this tutorial.