Running bash script using gnu parallel
parallel
doesn't send the lines of input to stdin
of the command given to it, but appends the line to the command you give.
If you write it like you have, then you're effectively calling ./myscript.sh <INPUT>
, where you want to call ./myscript.sh
, and send the input as stdin
.
This should work:
head -n5 file1 | parallel -j 4 "echo {} | ./myscript.sh"
The {}
indicates to parallel
where you want the input to go, rather than the default of at the end.
--pipe is made for you:
cat file1 | parallel --pipe -N5 ./myscript.sh
But you need to change myscript.sh
so it does not save to result
but instead print the output to stdout. Then you can:
cat file1 | parallel --pipe -N5 ./myscript.sh > result
and avoid any mixing.