How to open this XML file to create dataframe in Python?
XML is a tree-like structure, while a Pandas DataFrame is a 2D table-like structure. So there is no automatic way to convert between the two. You have to understand the XML structure and know how you want to map its data onto a 2D table. Thus, every XML-to-DataFrame problem is different.
Your XML has 2 DataSets, each containing a number of Series. Each Series contains a number of Obs elements.
Each Series has a NAME attribute, and each Obs has OBS_STATUS, TIME_PERIOD and OBS_VALUE attributes. So perhaps it would be reasonable to create a table with NAME, OBS_STATUS, TIME_PERIOD, and OBS_VALUE columns.
I found pulling the desired data out of the XML a bit complicated, which makes me doubtful that I've found the best way to do it. But here is one way (PS. Thomas Maloney's idea of starting with the 2D table-like XLS data should be way simpler):
import lxml.etree as ETimport pandas as pdpath = 'feds200628.xml'def fast_iter(context, func, *args, **kwargs): """ http://lxml.de/parsing.html#modifying-the-tree Based on Liza Daly's fast_iter http://www.ibm.com/developerworks/xml/library/x-hiperfparse/ See also http://effbot.org/zone/element-iterparse.htm http://stackoverflow.com/a/7171543/190597 (unutbu) """ for event, elem in context: func(elem, *args, **kwargs) # It's safe to call clear() here because no descendants will be # accessed elem.clear() # Also eliminate now-empty references from the root node to elem for ancestor in elem.xpath('ancestor-or-self::*'): while ancestor.getprevious() is not None: del ancestor.getparent()[0] del contextdata = list()obs_keys = ['OBS_STATUS', 'TIME_PERIOD', 'OBS_VALUE']columns = ['NAME'] + obs_keysdef process_obs(elem, name): dct = elem.attrib # print(dct) data.append([name] + [dct[key] for key in obs_keys])def process_series(elem): dct = elem.attrib # print(dct) context = ET.iterwalk( elem, events=('end', ), tag='{http://www.federalreserve.gov/structure/compact/common}Obs' ) fast_iter(context, process_obs, dct['SERIES_NAME'])def process_dataset(elem): nsmap = elem.nsmap # print(nsmap) context = ET.iterwalk( elem, events=('end', ), tag='{{{prefix}}}Series'.format(prefix=elem.nsmap['kf']) ) fast_iter(context, process_series)with open(path, 'rb') as f: context = ET.iterparse( f, events=('end', ), tag='{http://www.federalreserve.gov/structure/compact/common}DataSet' ) fast_iter(context, process_dataset) df = pd.DataFrame(data, columns=columns)
yields
NAME OBS_STATUS TIME_PERIOD OBS_VALUE0 SVENY01 A 1961-06-14 2.98251 SVENY01 A 1961-06-15 2.99412 SVENY01 A 1961-06-16 3.00123 SVENY01 A 1961-06-19 2.99494 SVENY01 A 1961-06-20 2.98335 SVENY01 A 1961-06-21 2.99936 SVENY01 A 1961-06-22 2.9837...1029410 TAU2 A 2014-09-19 3.728967791029411 TAU2 A 2014-09-22 3.128361711029412 TAU2 A 2014-09-23 3.201465751029413 TAU2 A 2014-09-24 3.29972110
I would export the XLS formatted file to a CSV file (using a freely available program like Gnumeric or LibreOffice, or if you have it, Excel), and then read the CSV file into pandas. I know this is not exactly an answer to your final question, but parsing XML is an overly complicated solution to what you're trying to do.
Regarding parsing XML in Python, the lxml library is my favorite library to use. I find using the XPath query language together with an lxml parser to be the best route.
This code it work to transform to df this type of Excel XML file:
import pandas as pdfrom xml.sax import ContentHandler, parse# Reference https://goo.gl/KaOBG3class ExcelHandler(ContentHandler): def __init__(self): self.chars = [ ] self.cells = [ ] self.rows = [ ] self.tables = [ ] def characters(self, content): self.chars.append(content) def startElement(self, name, atts): if name=="Cell": self.chars = [ ] elif name=="Row": self.cells=[ ] elif name=="Table": self.rows = [ ] def endElement(self, name): if name=="Cell": self.cells.append(''.join(self.chars)) elif name=="Row": self.rows.append(self.cells) elif name=="Table": self.tables.append(self.rows)excelHandler = ExcelHandler()parse('feds200628.xls', excelHandler)df1 = pd.DataFrame(excelHandler.tables[0][10:], columns=excelHandler.tables[0][9])print df1.head()
I can't make comment (low reputation), but the answer of this question about "How to open Excel XML file programmatically" (with python and pandas) it should work.