R: how does a foreach loop find a function that should be invoked?
They behave differently because registerDoParallel
registers an mclapply
backend on Linux, while it registers a clusterApplyLB
backend on Windows. When using an mclapply
backend, there are essentially no data exporting issues, so it works on Linux. But with clusterApplyLB
, you can run into problems if foreach
doesn't auto-export the functions and data that are needed.
You can solve this problem by modifying FUN3
to export FUN
via the .export
option:
FUN3 <- function(a, b) { foreach(i=1:3, .export='FUN') %dopar% FUN(i, a, b)}
This solution works on both Linux and Windows, since .export
is ignored by the mclapply
backend.
As pointed out by Hong Ooi, you have an error in your use of clusterExport
, but I wouldn't use clusterExport
to solve the problem since it is backend specific.
In your clusterExport
call, remove the env=environment()
part. What you're doing is telling clusterExport
to look for your objects in a brand new environment, so naturally it doesn't find them.